B
    0dvG                 @   s   d Z ddlZddlmZmZ ddlmZ ddlZddlm	Z	 ddl
mZ ddlmZ dd	lmZ dd
lmZ ddlmZ ddlmZ dd ZG dd deeedZdS )zBase class for mixture models.    N)ABCMetaabstractmethod)time)	logsumexp   )cluster)BaseEstimator)DensityMixin)ConvergenceWarning)check_random_state)check_is_fittedc             C   s,   t | } | j|kr(td||| jf dS )zValidate the shape of the input parameter 'param'.

    Parameters
    ----------
    param : array

    param_shape : tuple

    name : str
    z:The parameter '%s' should have the shape of %s, but got %sN)nparrayshape
ValueError)paramZparam_shapename r   G/var/www/html/venv/lib/python3.7/site-packages/sklearn/mixture/_base.py_check_shape   s
    

r   c               @   s   e Zd ZdZdd Zdd Zedd Zdd	 Zed
d Z	d2ddZ
d3ddZdd Zedd Zedd Zedd Zdd Zd4ddZdd Zdd  Zd5d"d#Zd$d% Zed&d' Zed(d) Zd*d+ Zd,d- Zd.d/ Zd0d1 ZdS )6BaseMixturezBase class for mixture models.

    This abstract class specifies an interface for all mixture classes and
    provides basic common methods for mixture models.
    c             C   s@   || _ || _|| _|| _|| _|| _|| _|| _|	| _|
| _	d S )N)
n_componentstol	reg_covarmax_itern_initinit_paramsrandom_state
warm_startverboseverbose_interval)selfr   r   r   r   r   r   r   r   r   r    r   r   r   __init__0   s    zBaseMixture.__init__c             C   s   | j dk rtd| j  | jdk r0td| j | jdk rHtd| j | jdk r`td| j | jdk rxtd| j | | dS )	zCheck values of the basic parameters.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)
           zOInvalid value for 'n_components': %d Estimation requires at least one componentg        zKInvalid value for 'tol': %.5f Tolerance used by the EM must be non-negativezCInvalid value for 'n_init': %d Estimation requires at least one runzKInvalid value for 'max_iter': %d Estimation requires at least one iterationzUInvalid value for 'reg_covar': %.5f regularization on covariance must be non-negativeN)r   r   r   r   r   r   _check_parameters)r!   Xr   r   r   _check_initial_parametersH   s*    









z%BaseMixture._check_initial_parametersc             C   s   dS )zCheck initial parameters of the derived class.

        Parameters
        ----------
        X : array-like of shape  (n_samples, n_features)
        Nr   )r!   r%   r   r   r   r$   u   s    zBaseMixture._check_parametersc             C   s   |j \}}| jdkrRt|| jf}tj| jd|d|j}d|t	||f< nF| jdkr|
|| j}||jddddtjf  }ntd| j | || dS )a?  Initialize the model parameters.

        Parameters
        ----------
        X : array-like of shape  (n_samples, n_features)

        random_state : RandomState
            A random number generator instance that controls the random seed
            used for the method chosen to initialize the parameters.
        Zkmeansr#   )Z
n_clustersr   r   random)axisNz(Unimplemented initialization method '%s')r   r   r   Zzerosr   r   ZKMeansfitZlabels_ZarangeZrandsumnewaxisr   _initialize)r!   r%   r   	n_samples_resplabelr   r   r   _initialize_parameters   s    


 z"BaseMixture._initialize_parametersc             C   s   dS )zInitialize the model parameters of the derived class.

        Parameters
        ----------
        X : array-like of shape  (n_samples, n_features)

        resp : array-like of shape (n_samples, n_components)
        Nr   )r!   r%   r/   r   r   r   r,      s    
zBaseMixture._initializeNc             C   s   |  || | S )a  Estimate model parameters with the EM algorithm.

        The method fits the model ``n_init`` times and sets the parameters with
        which the model has the largest likelihood or lower bound. Within each
        trial, the method iterates between E-step and M-step for ``max_iter``
        times until the change of likelihood or lower bound is less than
        ``tol``, otherwise, a ``ConvergenceWarning`` is raised.
        If ``warm_start`` is ``True``, then ``n_init`` is ignored and a single
        initialization is performed upon the first call. Upon consecutive
        calls, training starts where it left off.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)
            List of n_features-dimensional data points. Each row
            corresponds to a single data point.

        y : Ignored
            Not used, present for API consistency by convention.

        Returns
        -------
        self : object
            The fitted mixture.
        )fit_predict)r!   r%   yr   r   r   r)      s    zBaseMixture.fitc             C   s  | j |tjtjgdd}|jd | jk rDtd| j d|jd  | | | jo\t	| d }|rj| j
nd}tj }d| _t| j}|j\}}xt|D ]}	| |	 |r| || |rtj n| j}
xltd| jd D ]X}|
}| |\}}| || | ||}
|
| }| || t|| jk rd	| _P qW | |
 |
|ksX|tj kr|
}|  }|}qW | jstd
|	d  t | | || _ || _| |\}}|j!ddS )a  Estimate model parameters using X and predict the labels for X.

        The method fits the model n_init times and sets the parameters with
        which the model has the largest likelihood or lower bound. Within each
        trial, the method iterates between E-step and M-step for `max_iter`
        times until the change of likelihood or lower bound is less than
        `tol`, otherwise, a :class:`~sklearn.exceptions.ConvergenceWarning` is
        raised. After fitting, it predicts the most probable label for the
        input data points.

        .. versionadded:: 0.20

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)
            List of n_features-dimensional data points. Each row
            corresponds to a single data point.

        y : Ignored
            Not used, present for API consistency by convention.

        Returns
        -------
        labels : array, shape (n_samples,)
            Component labels.
        r   )dtypeZensure_min_samplesr   z:Expected n_samples >= n_components but got n_components = z, n_samples = 
converged_r#   FTzzInitialization %d did not converge. Try different init parameters, or increase max_iter, tol or check for degenerate data.)r(   )"_validate_datar   Zfloat64Zfloat32r   r   r   r&   r   hasattrr   infr5   r   r   range_print_verbose_msg_init_begr1   Zlower_bound_r   _e_step_m_stepZ_compute_lower_bound_print_verbose_msg_iter_endabsr   _print_verbose_msg_init_end_get_parameterswarningswarnr
   _set_parametersZn_iter_argmax)r!   r%   r3   Zdo_initr   Zmax_lower_boundr   r-   r.   initlower_boundn_iterZprev_lower_boundlog_prob_normlog_respZchangeZbest_paramsZbest_n_iterr   r   r   r2      sR    





zBaseMixture.fit_predictc             C   s   |  |\}}t||fS )a  E step.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)

        Returns
        -------
        log_prob_norm : float
            Mean of the logarithms of the probabilities of each sample in X

        log_responsibility : array, shape (n_samples, n_components)
            Logarithm of the posterior probabilities (or responsibilities) of
            the point of each sample in X.
        )_estimate_log_prob_respr   mean)r!   r%   rH   rI   r   r   r   r;   (  s    zBaseMixture._e_stepc             C   s   dS )a*  M step.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)

        log_resp : array-like of shape (n_samples, n_components)
            Logarithm of the posterior probabilities (or responsibilities) of
            the point of each sample in X.
        Nr   )r!   r%   rI   r   r   r   r<   ;  s    zBaseMixture._m_stepc             C   s   d S )Nr   )r!   r   r   r   r@   I  s    zBaseMixture._get_parametersc             C   s   d S )Nr   )r!   paramsr   r   r   rC   M  s    zBaseMixture._set_parametersc             C   s(   t |  | j|dd}t| |ddS )a  Compute the log-likelihood of each sample.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)
            List of n_features-dimensional data points. Each row
            corresponds to a single data point.

        Returns
        -------
        log_prob : array, shape (n_samples,)
            Log-likelihood of each sample in `X` under the current model.
        F)resetr#   )r(   )r   r6   r   _estimate_weighted_log_prob)r!   r%   r   r   r   score_samplesQ  s    zBaseMixture.score_samplesc             C   s   |  | S )a  Compute the per-sample average log-likelihood of the given data X.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_dimensions)
            List of n_features-dimensional data points. Each row
            corresponds to a single data point.

        y : Ignored
            Not used, present for API consistency by convention.

        Returns
        -------
        log_likelihood : float
            Log-likelihood of `X` under the Gaussian mixture model.
        )rO   rK   )r!   r%   r3   r   r   r   scored  s    zBaseMixture.scorec             C   s(   t |  | j|dd}| |jddS )a  Predict the labels for the data samples in X using trained model.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)
            List of n_features-dimensional data points. Each row
            corresponds to a single data point.

        Returns
        -------
        labels : array, shape (n_samples,)
            Component labels.
        F)rM   r#   )r(   )r   r6   rN   rD   )r!   r%   r   r   r   predictw  s    zBaseMixture.predictc             C   s.   t |  | j|dd}| |\}}t|S )a  Evaluate the components' density for each sample.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)
            List of n_features-dimensional data points. Each row
            corresponds to a single data point.

        Returns
        -------
        resp : array, shape (n_samples, n_components)
            Density of each Gaussian component for each sample in X.
        F)rM   )r   r6   rJ   r   exp)r!   r%   r.   rI   r   r   r   predict_proba  s    zBaseMixture.predict_probar#   c                s   t  |dk rtdj jj\} tj|j}j	dkrrt
fddtjj|D }nTj	dkrt
fddtj|D }n&t
 fddtjj|D }t
d	d t|D }||fS )
ay  Generate random samples from the fitted Gaussian distribution.

        Parameters
        ----------
        n_samples : int, default=1
            Number of samples to generate.

        Returns
        -------
        X : array, shape (n_samples, n_features)
            Randomly generated sample.

        y : array, shape (nsamples,)
            Component labels.
        r#   zNInvalid value for 'n_samples': %d . The sampling requires at least one sample.fullc                s$   g | ]\}}}  ||t|qS r   )multivariate_normalint).0rK   
covariancesample)rngr   r   
<listcomp>  s   z&BaseMixture.sample.<locals>.<listcomp>Ztiedc                s$   g | ]\}}  |jt|qS r   )rU   covariances_rV   )rW   rK   rY   )rZ   r!   r   r   r[     s   c                s,   g | ]$\}}}| | t|  qS r   )Zrandnr   sqrt)rW   rK   rX   rY   )
n_featuresrZ   r   r   r[     s   c             S   s    g | ]\}}t j||td qS ))r4   )r   rT   rV   )rW   jrY   r   r   r   r[     s    )r   r   r   Zmeans_r   r   r   ZmultinomialZweights_Zcovariance_typer   Zvstackzipr\   Zconcatenate	enumerate)r!   r-   r.   Zn_samples_compr%   r3   r   )r^   rZ   r!   r   rY     s0    




zBaseMixture.samplec             C   s   |  ||   S )a  Estimate the weighted log-probabilities, log P(X | Z) + log weights.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)

        Returns
        -------
        weighted_log_prob : array, shape (n_samples, n_component)
        )_estimate_log_prob_estimate_log_weights)r!   r%   r   r   r   rN     s    z'BaseMixture._estimate_weighted_log_probc             C   s   dS )zEstimate log-weights in EM algorithm, E[ log pi ] in VB algorithm.

        Returns
        -------
        log_weight : array, shape (n_components, )
        Nr   )r!   r   r   r   rc     s    z!BaseMixture._estimate_log_weightsc             C   s   dS )a9  Estimate the log-probabilities log P(X | Z).

        Compute the log-probabilities per each component for each sample.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)

        Returns
        -------
        log_prob : array, shape (n_samples, n_component)
        Nr   )r!   r%   r   r   r   rb     s    zBaseMixture._estimate_log_probc          	   C   sL   |  |}t|dd}tjdd ||ddtjf  }W dQ R X ||fS )a@  Estimate log probabilities and responsibilities for each sample.

        Compute the log probabilities, weighted log probabilities per
        component and responsibilities for each sample in X with respect to
        the current state of the model.

        Parameters
        ----------
        X : array-like of shape (n_samples, n_features)

        Returns
        -------
        log_prob_norm : array, shape (n_samples,)
            log p(X)

        log_responsibilities : array, shape (n_samples, n_components)
            logarithm of the responsibilities
        r#   )r(   ignore)ZunderN)rN   r   r   Zerrstater+   )r!   r%   Zweighted_log_probrH   rI   r   r   r   rJ     s
    
 z#BaseMixture._estimate_log_prob_respc             C   sB   | j dkrtd|  n&| j dkr>td|  t | _| j| _dS )z(Print verbose message on initialization.r#   zInitialization %dr   N)r   printr   _init_prev_time_iter_prev_time)r!   r   r   r   r   r:     s    

z'BaseMixture._print_verbose_msg_init_begc             C   sX   || j  dkrT| jdkr&td|  n.| jdkrTt }td||| j |f  || _dS )z(Print verbose message on initialization.r   r#   z  Iteration %dr   z0  Iteration %d	 time lapse %.5fs	 ll change %.5fN)r    r   re   r   rg   )r!   rG   Zdiff_llZcur_timer   r   r   r=   "  s    

z'BaseMixture._print_verbose_msg_iter_endc             C   sD   | j dkrtd| j  n&| j dkr@td| jt | j |f  dS )z.Print verbose message on the end of iteration.r#   zInitialization converged: %sr   z7Initialization converged: %s	 time lapse %.5fs	 ll %.5fN)r   re   r5   r   rf   )r!   llr   r   r   r?   /  s    

z'BaseMixture._print_verbose_msg_init_end)N)N)N)r#   )__name__
__module____qualname____doc__r"   r&   r   r$   r1   r,   r)   r2   r;   r<   r@   rC   rO   rP   rQ   rS   rY   rN   rc   rb   rJ   r:   r=   r?   r   r   r   r   r   )   s0   -
!

_

<
	r   )	metaclass)rl   rA   abcr   r   r   numpyr   Zscipy.specialr    r   baser   r	   
exceptionsr
   utilsr   Zutils.validationr   r   r   r   r   r   r   <module>   s   